The Pan Omics & Data Science (PODS) Core
provides omic study support for members of the Michigan Center on Lifestage Environmental Exposures and Disease.
Contacts
Jaclyn Goodrich
734-647-4564
[email protected]
Kai Wang
734-763-8013
[email protected]
Maureen Sartor, PhD
734-763-8013
[email protected]
Location
School of Public Health
1415 Washington Heights, Ann Arbor, MI
Public Health
Who We Serve
Members of M-LEEaD Center, M-LEEaD Center grant recipients, and researchers associated with all Center-related projects
Core Summary
The Pan Omics & Data Science (PODS) Core provides comprehensive and innovative support for members of the Michigan Center on Lifestage Environmental Exposures and Disease (M-LEEaD). We also support M-LEEaD pilot grant recipients. The PODS Facility Core services include assistance with study design, sample collection and preparation, data analyses, results integration and interpretation, advanced visualizations, and dissemination for a broad range of omics-based studies, including integration with clinical/ translational data. Specific omics approaches supported by the PODS Core include genomic assays (WGS, SNP arrays), RNA-seq (bulk and single-cell), microRNA expression, DNA methylation assays (BeadChip, ERRBS, WGBS, meDIP-seq), DNA hydroxymethylation, ATAC-seq (bulk and single-cell), ChIP-seq, adductomics, and microbiome profiling. We also provide support for downstream analyses such as pathway analyses, multi-omics data integration, and predictions using machine learning.
Services
- Bioinformatics analysis
DNA methylation (EPIC BeadChip, bisulfite sequencing), Integrative omics analyses, Pathway and interaction network analyses,
- Consultations for omics experiments
DNA/RNA extractions, Facilitate interactions with other Cores (e.g. Metabolomics), Sample preparation, Study design, Targeted validations,